Assembly and intrahost/low-frequency variant calling for viral samples
-
Updated
Jul 3, 2024 - Nextflow
Assembly and intrahost/low-frequency variant calling for viral samples
A tool suite for a simple, streamlined and rapid evaluation of variant callsets
A Nextflow Assembly Pipeline for Downstream Analysis of long reads (ONT) - Genome Assembly .
Nextflow Pipeline for Strain Resolution from Long Reads
Nextflow pipeline incorporating the tracm alignment step alone.
Nextflow pipeline for basecalling / demultiplexing ONT data, using Dorado
Single-cell/nuclei pipeline for data derived from Oxford Nanopore
Add a description, image, and links to the oxford-nanopore topic page so that developers can more easily learn about it.
To associate your repository with the oxford-nanopore topic, visit your repo's landing page and select "manage topics."