Measure Cell Size in 3D

Segmentation tool that segments 3D medical images using CNNs. Trained on CT-images of the pathological pancreas with Caffe.

R Scripts used in scRNA-seq analysis of T2D Islets

R scripts used to analyze single-nucleus RNA-seq data generated from in vitro differentiated pancreatic organoids, described in Huang, L. et al. 2021 (in press).

The YOLOv4 is used for pancreas detection on CT-scans.

Journal Watch for PBPath.org

The official PyTorch implementation for paper "Hierarchical 3D Feature Learning for Pancreas Segmentation"

The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysis of the human pancreatic ductal progenitor cell niche

Code for Walker, Saunders, Rai et al., (2021).

💜 Codice Viola is committed to improving the survival and quality of life of patients with pancreatic adenocarcinoma

Fancy basic vizs for

Official PyTorch implementation for paper: "Neural Transformers for Intraductal Papillary Mucosal Neoplasms (IPMN) Classification in MRI images"

📷⛑ Segmentation of Pancreatic Images using LinTransUNet

Single cell app-Islets

Code repository for paper: "A deep learning model to triage and predict adenocarcinoma on pancreas cytology whole slide imaging"

[ISBI 2024] Leveraging Unlabeled Data for 3D Medical Image Segmentation through Self-Supervised Contrastive Learning

An Interactive Web Application for Quality Control and Analysis of Insulin Secretion from Pancreatic Beta Cells

[WACV 2024] Beyond Self-Attention: Deformable Large Kernel Attention for Medical Image Segmentation

Tensorflow implementation of a 3D-CNN U-net with Grid Attention and DSV for pancreas segmentation trained on CT-82.