Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
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Updated
Feb 20, 2024 - R
Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data
An R Package for Multiplex PCR Primer Design and Analysis
Archived repo - This R Package is not developed anymore (only maintenance). It was replaced by R package rchemo
**DEPRECATED** A Shiny Application for the openPrimeR R Package
R package providing a shiny GUI to the functions implemented in rBiasCorrection
Fortify your ddPCR analyses for low-frequency variant detection
This project is on Data Mining process using R depending on ISLR book.
hrmR is a shiny app for HRM analysis, using RFU data. The app is tested for Cfx96 data, but any data should suffice, as long as the format is the same. Besides different plots, the app has also comprehensive clustering options.
R package to correct measurement biases in gene methylation analyses
Code and data used for analysis and estimation of invertebrate biodiversity on a temperate forested island (Hauturu) based on DNA barcodes and soil DNA metabarcoding data.
Interval estimation of population allele frequency based on quantitative PCR double-Delta Cq measures from bulk samples
openMELT is HRM data analysis software with aim to enable HRM accessible for everyone.
Sequence processing and analysis code used to investigate the effects of different DNA extraction methods and PCR variability on multi-taxon DNA meta-barcoding estimates of soil biodiversity.
Model Selection Using PCR, PLSR, Best subsets, Ridge Regression and Lasso Regression
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