multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
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Updated
Apr 1, 2024 - Python
multiPrime is a mismatch-tolerant minimal primer set design tool for large and diverse sequences (e.g. Virus). Here is a web-based version (test: http://multiPrime.cn))
The SpeciesPrimer pipeline is intended to help researchers finding specific primer pairs for the detection and quantification of bacterial species in complex ecosystems.
MFEprimer-2.0: A fast thermodynamics-based program for checking PCR primer specificity
A PCR primer tool for DNA assembly flows
This project will give real analysis of Option chain along with PCR Graph and MaxPain gragh
Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.
CRISPR/Cas-directed HDR genome editing suite: finds+scores gRNA targets, generates donor DNAs, & produces optimal cPCR primer designs.
A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment
Bioinformatics CNV Detection with Random Forest Model
Real-time PCR data viewer (Python 3 GUI with wxPython)
Variant Primer Design
size and concentration calculation of DNA bands in an agarose gel
A tool to select the best primers to perform quantitative metabarcoding studies.
A lightweight Python package to perform in silico PCR
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