Small model to simulate biomass production on a global scale. Products are Gross Primary Production (GPP), Net Primary Production (NPP). It is based on a modified version of the Farquhar approach (Haxeltine and Prentice 1996, Farquhar et al. 1980). Where possible, it uses vectorization and parallelization and dynamically downloads latest av

R scripts for automatic correction of Rapid A-Ci curves

Helper functions for Licor 6400 IRGA gas exchange files

the LI6400 portable photosynthesis meter exports data as a series of poorly formatted .xls files. If you've used "add remark" to indicate sample ID, these are shown as rows, not a separate column. This script extracts relevant data, and moves the sample ID information from remarks into a column.

Yet another R package to analyse the light response of photosynthesis

An R implementation of the P-model (new fork).

Scripts and Data underlying the 2017 Ecological Modelling paper on UVAFME-VOC.

Data and R code accompanying article 10.1111/gcb.16299 in Global Change Biology

Data and R code accompanying article 10.3354/meps13886 in Marine Ecology Progress Series.

Scripts to manage and clean data from Photosynthesis-Irradiance curves obtained from different methods

R package to import files generated by the WALZ GFS3000 photosynthesis system