Imputation and Admixture for lcWGS in one goal
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Updated
Jul 17, 2024 - C++
Imputation and Admixture for lcWGS in one goal
Repository for "Hybridization and inbreeding affect the survival of a critically endangered coral"
R implementation of the BAPS software for Bayesian Analysis of Population Structure
R package and web app for spatial visualisation of admixture on a projected map
Crowdfunding Data Analysis
strataG is a toolkit for haploid sequence and multilocus genetic data summaries, and analyses of population structure.
Graph decorators for data and population structure visualization 🐙
Nextflow pipeline for analyzing empirical WGS data for the effect of positive selection on IBD-based inference
Nextflow pipeline to assess the impact of positive selection on Identity by Descent (IBD)-based inferences, utilizing population genetic simulations and true IBD inferences.
R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecular data. Those will be introduced during the course.
Collection of materials for teaching about autoencoders
Fine-scale genetic structure in South Western Cameroon
An R package to analyse and visualise admixture proportions from STRUCTURE, fastSTRUCTURE, TESS, ADMIXTURE etc.
Genetic Ancestry
A Snakemake powered pipeline developed to perform population structure and admixture analysis given multiple Variant Call Format datasets. This has been developed in partial fulfilment of a MSc in Bioinformatics at the University of Pretoria by Graeme Ford.
An integrated pipeline for analysis and visualization of Population Structure and Relatedness based on genome-wide genetic variant data
A comprehensive tutorial about GWAS and PRS
STAT488 - Multivariate Statistics final project at Loyola University Chicago
BIOI500 - Advanced Bioinformatics final project at Loyola University Chicago.
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