Get protein embeddings from protein sequences

Protein Secondary Structure predictor using Convolutional Neural Networks

ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning

cTPnet Package

Transmembrane proteins predicted through Language Model embeddings

Prediction of Binding Residues in Disordered Regions Based on Protein Embeddings; TUM Master Praktikum Bioinformatics 2022 (Project #3) and Master's Thesis

Python framework for interpretable protein prediction

Predicting phosphorylation sites from sequence and structure via a GNN

Scripts and data regarding Vampyrellida genomics.

Utilizes Markov Models to predict protein coding genes

Repository for the software engineering project during the second year of the Master of Bioinformatics at the University of Bordeaux.

HNOXPred: a web tool for the prediction of gas sensing H-NOX proteins from amino acid sequence

Code and results for the practical exercises of the course "Protein Prediction 2" in Winter 21/22 at TUM Authors: Adrian Henkel, Finn Gaida, Lis Arend, Sebastian Dötsch, Shlomo Libo Feigin

Transmembrane proteins predicted through Language Model embeddings

Repository containing bio_embeddings resources