This is a Python package for classifying DAmFRET data based on supervised learning. The data can also be analyzed to allow mechanistic inferences regarding nucleation of ordered assemblies.
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Updated
Mar 25, 2021 - Python
This is a Python package for classifying DAmFRET data based on supervised learning. The data can also be analyzed to allow mechanistic inferences regarding nucleation of ordered assemblies.
A Bio2BEL package for converting ExPASy to BEL
Repository of the FANDAS code for prediction ssNMR spectra from structure
Development branch of sacdallago/biotrainer
PDBench is a dataset and software package for evaluating fixed-backbone sequence design algorithms.
Fast regex-based protein digestion and unique peptides finder tool
A native Windows application that allows for the conversion of DNA to RNA and its respective proteins. Despite being created on and for Windows, the application has been styled after the GUI found on MacOS. The executable is now downloadable. The current release is v1.0.0.
Tool for predicting the functionalities of certain proteins and display similar proteins that was developed as part of my programming course.
Provides all known proteins for a given reaction, and ranks them based on how relevant they are for your project.
Algorithms to emulate the synthesis process of proteins.
This repository provides a Python implementation of the NapShift program to predict the backbone atoms' chemical shift values, from NMR protein PBD structures, using artificial neural networks.
A protein-glycan benchmark, ready for use with HADDOCK
CaMELS: In silico prediction of calmodulin binding proteins and their binding sites
Split flow imaging microscopes (FlowCam and FlowCam nano) collage images into a single image.
MMIC for extracting and fixing PDB files converted to MMSchema molecules
A Bio2BEL package for converting InterPro to BEL
Provides a Python implementation of the camcoil program (originally written in C) to estimate the random coil chemical shift values from a sequence (string) of amino-acids.
Synthesize those proteins!
UniGet is a tool written in Python used to search, filter, and fetch records from the UniProt database
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