REANA: Reusable research data analysis platform
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Updated
Sep 19, 2024 - Python
REANA: Reusable research data analysis platform
A curated list of reproducible research case studies, projects, tutorials, and media
DaCy: The State of the Art Danish NLP pipeline using SpaCy
Textbook that provides JavaScript and Python code to create open reproducible remote sensing analyses and workflows in Google Earth Engine.
Live code in Pandoc Markdown
Collective Knowledge extension with unified and customizable benchmarks (with extensible JSON meta information) to be easily integrated with customizable and portable Collective Knowledge workflows. You can easily compile and run these benchmarks using different compilers, environments, hardware and OS (Linux, MacOS, Windows, Android). More info:
Module 3: Reproducible Research and Data Analysis
Estimate fastq-formatted read abundace in RNA-Seq analysis with Kallisto
Revistas de Economia com a nova classificação Qualis 2019: lista extraída a partir daquele PDF de quatrocentas páginas!
How to use Jupyter notebooks and R markdown to create living documents and reproducible reports.
Count your fastq-formatted rna-seq reads with Salmon
Snakemake workflow for Salmon quantification and FastQC quality controls
The Micro Remote Sensing course - provides a complete introduction to reproducible flight planning, acquisition, pre-processing, and exemplar analysis of high resolution low budget image data using commercial and open software systems.
Build a re-usable end-to-end pipeline for predicting short-term rental prices in NYC
Exercise Staters and solutions for cd0581-building-a-reproducible-model-workflow by Giacomo Vianello
Python utility functions
R utility functions
Snakemake workflow used to call germline and/or somatic variants with GATK Mutect2
Get your Ph.D. reproducible with Python and Github
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