Project for the Transcriptomic course of "Bioinformatics for Computational Genomics" MSc
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Updated
Aug 31, 2023 - HTML
Project for the Transcriptomic course of "Bioinformatics for Computational Genomics" MSc
HTSeq (0.11.2) wrapper module: Counting reads in features with 'htseq-count'
Code to reproduce analyses in Iron Responsive Element (IRE)-mediated responses to iron dyshomeostasis in Alzheimer’s disease (Hin et al.)
Understanding the ageing of human brain endothelial cells using single-cell RNA-seq analysis.
Exploring Bioinformatics pipelines
Differential Gene Expression analysis in R using DESeq2
This repository has teaching materials for a 2 and 3-day Introduction to RNA-sequencing data analysis workshop using the O2 Cluster
Transcriptional differences between Miscanthus hybrids with contrasting starch and sucrose concentrations and biomass production
Code for Karakaslar, Katiyar et al., Aging Cell 2023
RNA-seq differential expression project
Analysis of summer nurse & forager and winter honey bee fat body and flight muscle transcriptomes
This repository for analysing lncRNAs from RNA-seq anthracycline data (HeCaToS project)
Programming in practice based on RNA-seq, scRNA-seq, ATAC-seq, scATAC-seq or ChIP-seq.
Material used for a bioinformatics computer lab course, covering DNA/RNA sequence assembly and analysis, phylogenetic analysis, gene functional annotation, and metagenomic analysis
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