Code, documentation, and tutorials for the DGD model trained on bulk RNA-Seq data.
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Updated
Jul 19, 2024 - Python
Code, documentation, and tutorials for the DGD model trained on bulk RNA-Seq data.
A collection of Galaxy-related training material
ExpoSeq is a pipeline to process and analyze in various visualizations ngs data from phage display campaigns
This repository contains an example implementation of DESeq2 in Python.
This repository contains the python package for Helical
interactive Bioinformatics Exploratory Tools
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.
A collection of various tools useful for the deep analysis of data generated via the CRSSANT/rna2d3d pipeline.
Workshop • Intro to Bioinformatics using NGS data • 5 days
Analyze your RNA sequencing data without writing a single line of code
WDL workflow for RSEM tool (transcription analysis for RNAseq)
RNAseq pipeline for alternative splicing junctions
Workflow for Sequenza, cellularity and ploidy
This repository is the current repository for our Jones et al. 2024 manuscript titled Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.
Differential gene expression analysis and pathway analysis of RNAseq data
Fast, efficient RNA-Seq metrics for quality control and process optimization
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
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