Awesome GRN enhanced AnnData toolkit
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Updated
May 27, 2024 - Python
Awesome GRN enhanced AnnData toolkit
scverse lineage tracing analysis toolkit
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
anndata with trees
Multimodal Data (.h5mu) implementation for Python
Electronic Health Record Analysis with Python.
Perturbation Analysis in the scverse ecosystem.
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
muon is a multimodal omics Python framework
Annotated data.
Deep probabilistic analysis of single-cell and spatial omics data
Single-cell analysis in Python. Scales to >1M cells.
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