scverse lineage tracing analysis toolkit
-
Updated
May 28, 2024 - Python
scverse lineage tracing analysis toolkit
anndata with trees
Awesome GRN enhanced AnnData toolkit
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
Multimodal Data (.h5mu) implementation for Python
Perturbation Analysis in the scverse ecosystem.
Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Electronic Health Record Analysis with Python.
muon is a multimodal omics Python framework
Annotated data.
Deep probabilistic analysis of single-cell and spatial omics data
Single-cell analysis in Python. Scales to >1M cells.
Add a description, image, and links to the scverse topic page so that developers can more easily learn about it.
To associate your repository with the scverse topic, visit your repo's landing page and select "manage topics."