Miscellaneous collection of code snippets for diverse purposes
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Updated
Sep 22, 2020 - Python
Miscellaneous collection of code snippets for diverse purposes
Synthetic 3d image generation for Vascular Deformation Project.
Unsupervised Feature Extraction for Assessing Recurrence of Lung Cancer
An python script for register image with SIFT algoritm and comparison them with difference and merge
Calculate b-value images from two or more other b-value images using a monoexponential model (for prostate mpMRI).
Semantic segmentation and image-to-image translation based on AI
Wrap SimpleITK functions as command lines
Dicom Image Registration Program in Python using a modified SimpleITK/SimpleElastix module compiled from source
Use Bspline in simpleITK to transform images and show the deformation flow
SimpleITK tools for use at the command line
HVSMR 2016: MICCAI Workshop on Whole-Heart and Great Vessel Segmentation from 3D Cardiovascular MRI in Congenital Heart Disease
Implementation of various label fusion approaches for medical imaging.
evalutils helps users create extensions for grand-challenge.org
Extract and evaluate radiomics for liver cancer tumors from DICOM segmentation masks. Using SimpleITK, PyRadiomics and PyDicom.
There are some examples of 3D Medical Image Process
Python script to extract a STL surface from a DICOM image series.
LiTS - Liver Tumor Segmentation Challenge
Image process framework based on plugin like imagej, it is esay to glue with scipy.ndimage, scikit-image, opencv, simpleitk, mayavi...and any libraries based on numpy
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