screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics
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Updated
Oct 29, 2020 - Nextflow
screening metagenomes for arbitrary lineages, using gene-centric assembly methods and phylogenetics
NYU Langone Genome PACT (Genome Profiling of Actionable Cancer Targets) targeted exome sequencing analysis pipeline.
A containerized nextflow pipeline designed to annotate prokaryote genomes.
Custom Nextflow scripts for microbiome assembly and AntiSMASH BGC analyses. Based around microbiome assemblers: Megahit & MetaSpades
Bayesian phylogenetic analysis
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