Converts moutainsorted clusters to phy for curation using SpikeInterface. Includes a plugin to add mountainsort cluster metrics to phy.
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Updated
Jan 28, 2022 - Python
Converts moutainsorted clusters to phy for curation using SpikeInterface. Includes a plugin to add mountainsort cluster metrics to phy.
Spike Cluster Score (SCS) is a clustering performance metric designed with the purpose of spike sorting in mind.
An Engine for Dynamic Enhancement and Noise Overcoming in Spatiotemporal Multimodal Neural Observations via High-density Microelectrode Arrays
WaveClus: Unsupervised Spike Sorting Algorithm
OSSA (Open-Source Sorting Algorithm) is an interactive software for manual curation of neural spikes.
Implementation of semi-automatic spike interface pipeline on tungsten WARP data for the myriad cluster
Python Implementation of GLMCC (generalized linear model for spike cross-correlations)
A study of how autoencoders fare in the domain of Spike Sorting. Various autoencoder architectures have been tested.
Neural spike sorting algorithm based on iso-cut clustering and template matching in raw voltage space for the detection of near-simultaneous spike events.
A reproducible document with an extended version of SPySort: Neuronal Spike Sorting with Python Proceedings of the 7th European Conference on Python in Science (EuroSciPy 2014), edited by Pierre de Buyl and Nelle Varoquaux, pp. 27–34.
Automatic and manual spike sorting based on SpikeInterface
a graphical tool for generating hybrid ground-truth spiking data for evaluating spike sorting performance
Offline real time (ort) implementation of SpyKING CIRCUS
A GUI for running popular spike sorting algorithms on extracellular data of any file format.
Automatic spike sorting, cluster visualization, spike sorting GUIs
YASS: Yet Another Spike Sorter
Python-based module with spike sorter wrappers and a simple API for running them.
Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
Fast and scalable spike sorting in python
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