Algorithms and Data Structures
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Updated
Nov 18, 2022 - Python
Algorithms and Data Structures
A discrete maths project focusing on suffix trees
Algorithms code that I have worked on in Advanced Algorithm and Data Structure course in Monash Malaysia.
Substring Frequency Count using SuffixTree
Note Sequence and Arrangement Classifier
Suffix trees via Ukkonen's algorithm, as described by Gusfield
Quick and Dirty implemetation of Google Instant Like Suggestions using Suffix Tree
Repositório para apresentação de código desenvolvido pelo grupo 2 para a UC Algoritmos Avançados para a Bioinformática do Mestrado em Bioinformática, ano lectivo 23-24.
Suffix tree implementation using Ukkonen's suffix tree construction algorithm. Sample program written to find all occurrences of a query_string and rank documents according to relevence
Ranks text files given a query string on the basis of their relevance scores. Also displays all the occurrences of the given query string, the first occurrence and the longest matched substring if none is present. Implemented using Suffix Trees.
Various algorithms and data structures on strings
My solutions to problems of Code Jam 2021.
Sternum is a python package to map next generation sequencing reads to a reference genome using optimized methods
An assortment of scripts for parsing and understanding genetic code strings.
This is the repository for the code of my Computer Science bachelor's degree final paper.
A Python implementation of suffix tree
The research of accuracy of searching cycles methods in symbolic sequences (time series) with presence of random noises.
Tells you which "words" can be written as a publicly available domain
Python package for lexicon; Trie and DAWG implementation.
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