⚙️ Matching T-cell repertoire against a database of TCR antigen specificities
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Nov 12, 2018 - Groovy
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t-cell
Here are 13 public repositories matching this topic...
TCR Enrichment Analysis (TEA) Webtool
visualization
bioinformatics
r
computational-biology
t-cell
t-cell-receptor
enrichment-analysis
mait
trav1-2
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Updated
Apr 6, 2019 - R
🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
bioinformatics
t-cell
antibody
rep-seq
scrna-seq-data
immunoinformatics
computational-immunology
immune-repertoire-data
covid-19
sars-cov-2
covid-19-data
single-cell-data
airr-analysis
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Updated
May 21, 2020
Python SDK for Immune Epitope Database (IEDB) Analysis Tools API
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Updated
May 11, 2021 - Python
This neural-network can predict the effector/memory T cell (T lymphocyte) subset of single cells based on flow cytometry data with 99,22% accuracy.
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Updated
May 6, 2022 - Jupyter Notebook
T-cell motility simulator
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Updated
Feb 4, 2024 - Fortran
Post-analysis of immune repertoire sequencing data
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Updated
May 23, 2024 - Groovy
Bayesian models used in CD56bright natural killer cells preferentially kill proliferating CD4+ T cells
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Jun 28, 2024 - R
🗂️ [vdjdb.cdr3.net is up and running] Git-based TCR database storage & management. Submissions welcome!
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Nov 15, 2024 - Groovy
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
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Updated
Oct 29, 2024 - Groovy
MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.
bioinformatics
rna-seq
sequencing
immunology
t-cell
antibody
t-cell-receptor
rep-seq
single-cell
10x
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Updated
Nov 7, 2024 - Kotlin
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