Extensive de-novo TE Annotator
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Updated
May 23, 2024 - Perl
Extensive de-novo TE Annotator
A toolkit for annotation of transposable element families from unassembled sequence reads
A tool for discovering transposable elements and describing patterns of genome evolution
starfish: a modular toolkit for giant mobile element annotation
Transposon Insertion Finder - Detection of new TE insertions in NGS data
Genotyping of segregating mobile elements insertions
Nextflow workflow for automatic repeat detection, classification and masking
Transposable Element Finder - Detection of active transposable elements from NGS data
Database-Integrated Genome Screening (DIGS) tool. Explore the dark genome using BLAST and a relational database.
TE annotation pipeline and analysis scripts for the insect mobilome publication by Petersen et al.
CLI tool for bioinformatic in-depth exploration of small RNA-seq data
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