A collection of scripts documenting the parameter settings used to apply variant discovery to the exploration of Duodenal Polyposis.

For the convenience of checking the contents of gene, transcripts，nucleic acid or amino acid sequences.

A tool for quality control and annotation of variant peptides after FDR in proteogenomics

Pipeline which make phylogeny with sequence of different sample

A simple Perl script to compute DeltaESRSeq to predict exon skipping induced by exonic variants

🔍 💊 Detection of low-frequency SNPs in next-generation sequencing data of Mycobacterium tuberculosis complex strains

VAP : For Reference mapping and Variant detection.

Explore and filter structural variant calls from Lumpy and Delly VCF files

MTBseq is an automated pipeline for mapping, variant calling and detection of resistance mediating and phylogenetic variants from illumina whole genome sequence data of Mycobacterium tuberculosis complex isolates.

Mutation Identification Pipeline. Read the latest documentation: