vcf
Here are 21 public repositories matching this topic...
✂️ ⚡ Rapid haploid variant calling and core genome alignment
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Oct 18, 2023 - Perl
Learning the Variant Call Format
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Mar 25, 2024 - Perl
Program for estimating πN/πS, dN/dS, and other diversity measures from next-generation sequencing data
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Aug 21, 2023 - Perl
convert your 23andme raw file to VCF | DEPRECATED, please see https://github.com/plantimals/2vcf
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Aug 27, 2019 - Perl
Application of pan-genome for population
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May 13, 2024 - Perl
Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model
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Dec 26, 2023 - Perl
microhaplotype visualizer and analyzer
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Jun 24, 2021 - Perl
Small scripts for population genetics analysis
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May 31, 2023 - Perl
Evolutionary Bioinformatics Toolkit (EBT)
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Jul 14, 2020 - Perl
Construct gene haplotype with VCF format files and snpEff annotation.
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May 16, 2022 - Perl
Genotyping of segregating mobile elements insertions
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Jul 29, 2021 - Perl
Calculate similarity between different samples using VCF format varaint data for IBS/IBD analysis.
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Jan 6, 2023 - Perl
Explore and filter structural variant calls from Lumpy and Delly VCF files
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Nov 30, 2020 - Perl
Pheno-Ranker is a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2.
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May 23, 2024 - Perl
Checks vcf files and removes loci and samples with too many missings, can also input genotypes in missing (various options for this).
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Dec 4, 2023 - Perl
Beacon v2 Reference Implementation (Data ingestion tools) - Actively maintained by the original author
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May 24, 2024 - Perl
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