Variant Calling and Annotation using PacBio Hi-Fi Reads
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Updated
Jul 3, 2024 - WDL
Variant Calling and Annotation using PacBio Hi-Fi Reads
Workflows and scripts for the assembly and analysis of RSV whole genome tiled amplicon sequencing.
MobidicWDL workflows
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
Strelka2 somatic variant calling workflow
Workflows and scripts for the assembly and analysis of enterovirus whole genome sequencing.
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Workflows and scripts for the assembly and analysis of SARS-CoV-2 whole genome tiled amplicon sequencing.
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Workflows and scripts for the assembly and analysis of mpox whole genome sequencing.
A collection of tasks wrapped in WDL
A collection of WDL bioinformatic workflows to benchmark markers coming from different pipelines using linkage map quality as a diagnosis.
WDL tasks for commonly used BFX tools
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A collection of reusable WDL tasks. Category:Other
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