@transmart

TranSMART Project

Open source translational data warehouse. Support: https://wiki.transmartfoundation.org/display/transmartwiki/Getting+Support

Pinned repositories

  1. transmartApp

    tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their…

    JavaScript 62 82

  2. SmartR

    SmartR

    JavaScript 11 15

  3. transmart-rest-api

    Forked from thehyve/transmart-rest-api

    HTTP available tranSMART RESTful API

    Groovy 2 9

  4. transmart-data

    Forked from thehyve/transmart-data

    Tools for managing tranSMART's database

    PLSQL 2 24

  5. transmart-core-db

    Forked from thehyve/transmart-core-db

    TranSMART Core

    Groovy 21

  • SmartR

    JavaScript 11 15 Apache-2.0 Updated Sep 10, 2018
  • tranSMART is a knowledge management platform that enables scientists to develop and refine research hypotheses by investigating correlations between genetic and phenotypic data, and assessing their analytical results in the context of published literature and other work.

    JavaScript 62 82 GPL-3.0 Updated Jul 20, 2018
  • Tools for managing tranSMART's database

    PLSQL 2 52 GPL-3.0 Updated Jun 7, 2018
  • Functional tests for tranSMART

    Groovy 6 Updated May 2, 2018
  • TranSMART Core

    Groovy 34 GPL-3.0 Updated Mar 12, 2018
  • blend4j-plugin is a grails plugin to access galaxy.

    Groovy 6 GPL-3.0 Updated Mar 12, 2018
  • A R statistical analysis module plugin for tranSMART

    Groovy 5 38 Apache-2.0 Updated Mar 12, 2018
  • Connector to link tranSMART to an XNAT server

    Groovy 6 Updated Mar 12, 2018
  • Groovy 4 GPL-3.0 Updated Mar 12, 2018
  • HTTP available tranSMART RESTful API

    Groovy 2 14 Updated Mar 12, 2018
  • JavaScript 5 Updated Mar 12, 2018
  • Java 6 Updated Mar 12, 2018
  • The tranSMART plugin Metacore

    Groovy 7 Updated Mar 12, 2018
  • Plink integration for tranSMART

    Groovy 4 GPL-3.0 Updated Mar 12, 2018
  • Contains the Grails domain declarations of the legacy transmart schema

    Groovy 7 GPL-2.0 Updated Mar 12, 2018
  • Elements that are being collected for refactoring but do not yet have a home. This project needs to be reviewed often!

    Java 1 11 Updated Mar 12, 2018
  • The transmart (and grails) plugin that contains the folder-management elements.

    Groovy 18 Updated Mar 12, 2018
  • tranSMART ETL pipelines and configurations

    Groovy 11 29 Updated Mar 12, 2018
  • A collection of scripts for managing all the tranSMART Foundation repositories

    Shell 5 GPL-3.0 Updated Feb 19, 2018
  • The transmart (and grails) plugin that contains the GWAS elements.

    PLSQL 15 Updated Jan 17, 2018
  • constraints

    Groovy 19 GPL-3.0 Updated Jan 17, 2018
  • A R module with packaged functions to query the tranSMART database directly

    R 3 12 Updated Oct 12, 2017
  • IpaApi

    Forked from ncittm/IpaApi
    Java 2 Apache-2.0 Updated Dec 7, 2016
  • Boilerplate code for tranSMART UI

    JavaScript 3 Updated Nov 25, 2016
  • Genome Wide Association Study Visualizer (from Pfizer)

    HTML 2 Updated Oct 18, 2016
  • mydas

    Forked from thehyve/mydas

    mydas is an easy-to-extend Java DAS server framework.

    Java 2 Updated Oct 17, 2016
  • ICE tool for transmart ETL (formerly FCL4tranSMART)

    Java 1 1 Updated Jul 19, 2016
  • tranSMART pipeline alternative to ETL, using Spring Batch

    Groovy 15 Updated Jul 19, 2016
  • This contains code for a prototype of "federation"

    Groovy Updated Jun 27, 2016
  • external configuration files for tranSMART application

    Groovy 6 5 Updated May 26, 2016
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