ERROR: unexpected error - database disk image is malformed

[bjonnh]

Bug Report

Please provide information about your setup

Output of dvc version: 1.3.1

Additional Information (if any):

Was doing a dvc pull after another dvc pull that crashed due to a full disk. I think I did a dvc pull in between that worked properly , but I can't say for sure. That's in a repo with 5 dvc files so only the sqlite section of that specific dataset failed.

Here is a full -vv output : https://bjonnh.net/share/out.gz

I tried to dump and restore the sqlite "state" db, but nothing solved the issue so I just deleted the cache, state, locks and files and dvc pulled the full thing again.

Unfortunately I deleted the state file and forgot to make a copy.

[efiop]

Hi @bjonnh .

I tried to dump and restore the sqlite "state" db, but nothing solved the issue so I just deleted the cache, state, locks and files and dvc pulled the full thing again.

Deleting the .dvc/tmp would be enough. state db is purely for local optimization and deleting it is safe.

[efiop]

Closing for now due to inactivity.

[gregstarr]

Deleting tmp folder fixed issue for me