Utilising Machine Learning to classify cancer using Paedatric Immune Repertoire

Installation

For non-developer

pip install graffit

For developer

pip install pdm pdm install -E pytest

Install torch specific version yourself here, see pyproject.toml for the exact numbering: https://pytorch.org/get-started/locally/

Name		Name	Last commit message	Last commit date
Latest commit History 235 Commits
.github		.github
75_soft_label_model		75_soft_label_model
MODELS		MODELS
docs		docs
sample_data		sample_data
scripts		scripts
src/graffit		src/graffit
tests		tests
.gitignore		.gitignore
.pre-commit-config.yaml		.pre-commit-config.yaml
AAidx_PCA_2024.txt		AAidx_PCA_2024.txt
README.md		README.md
TODO.md		TODO.md
pyproject.toml		pyproject.toml
readthedocs.yaml		readthedocs.yaml