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copick 0.5.1

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@uermel uermel released this 16 Jul 01:51
· 430 commits to main since this release
97b03ee

What's Changed

  • Remove pre-pick special case and simplify. Add some documentation. by @uermel in #1
  • Working FSSpec implementation of copick by @uermel in #2
  • Make FSSpec models work with the smb fs implementation by @uermel in #3
  • Uermel/qtmodel by @uermel in #4
  • object classes for copick by @uermel in #5
  • New API for copick segmentations by @uermel in #7
  • fix session id (uncomment) by @uermel in #9
  • Fix repr to allow true lazy loading of the runs, picks, tomos etc. by @uermel in #10
  • Better error message for wrong object name, Explicitely remove hidden files by @uermel in #11
  • Check for existing segmentations with greater specificity by @kephale in #14
  • Tests and CI by @uermel in #15
  • Add docs and docs CI by @uermel in #18
  • Add tests for S3-, SMB and SSH-based copick storage by @uermel in #19
  • Fix repr of CopickObject by @uermel in #23
  • Update fsspec requirement to allow writing Zarr via SMBFileSystem and sshfs by @uermel in #28
  • Update README by @uermel in #27
  • Improve the performance of the run-query by @uermel in #26
  • get_run and get_voxel_spacing allow random access to runs/voxel_spacings by @uermel in #25
  • Fix README and quick-start example to be consistent with tests by @andy-sweet in #30
  • Support cryoET data portal datasets by @uermel in #29
  • bump version to 0.5.1 by @uermel in #37

New Contributors

Full Changelog: https://github.com/uermel/copick/commits/0.5.1