Redesign of UI and stability improvements#14
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# Conflicts: # src/pyssa/controller/main_window_controller.py
…port/export processes
…date various parts
…egrate updated results summary dialog
…edictProteinDialog, and PyMOL Viewer panel to improve clarity and consistency
# Conflicts: # src/pyssa/gui/main_window.py
…data/help`; clean up outdated and redundant descriptions
…ng, color definitions, and PyMOL event handling; streamline imports
…lated HTML for clarity and consistency
…figuration with quality and style presets.
…ation; streamline object naming and help panel updates
…nu structure and object naming for consistency
…n with new settings
…ect in project creation view
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This pull request introduces a new release (v1.4.0) of PySSA, updating the version across all relevant files, and significantly refactors the Windows installer build process. The build script now uses a standalone Python distribution, installs dependencies in a more robust and reproducible way, and applies necessary patches for PyMOL integration. Additionally, the installer and launcher workflow have been improved for better user experience on Windows.
Furthermore, the GUI has been completely rewritten using PyQt6 and a unified main window with an embedded PyMOL instance.
Key changes include:
Release and Installer Version Updates
CITATION.cff,README.md,deployment/src/inno_setup/setup.iss, anddeployment/src/inno_setup/setup_only_src.iss, as well as all installer file names and user-facing references. [1] [2] [3] [4] [5] [6] [7]Windows Build System Refactor
automations/build_inno_setup.pybuild script to:site-packageslocation.PyMOL Integration and High DPI Support
pymol_gl_widget.pyto the deployment resources, enabling proper High DPI support and improved PyMOL widget behavior in the packaged application.Installer and Launcher Improvements
start_pyssa.batlauncher, which runs the correct Python interpreter and entry point in the user's local app data. [1] [2]These changes collectively improve the reproducibility, maintainability, and user experience of the PySSA Windows distribution.