Skip to content

Medical diagnosis fixes #529

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Merged
merged 2 commits into from
Feb 6, 2025
Merged

Medical diagnosis fixes #529

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
dec79a5
Remove image-server references from md docs
darkdoc Feb 5, 2025
704edc4
Fix broken images in MD docs
darkdoc Feb 5, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
4 changes: 0 additions & 4 deletions content/patterns/medical-diagnosis/demo-script.adoc
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -95,15 +95,11 @@ Look at all of the resources that have been created for this demo application. W

We are deploying this demo using self-signed certificates that are untrusted by our browser. Unless you have provisioned valid certificates for your OpenShift cluster you must accept the invalid certificates for:

* image-server | xraylab-1 namespace
* s3-rgw | openshift-storage namespace
* grafana | xraylab-1 namespace

[source,shell]
----
IMAGESERVER_ROUTE=https://$(oc get route -n xraylab-1 image-server -o jsonpath='{.spec.host}')

echo $IMAGESERVER_ROUTE

S3RGW_ROUTE=https://$(oc get route -n openshift-storage s3-rgw -o jsonpath='{.spec.host}')

Expand Down
34 changes: 6 additions & 28 deletions content/patterns/medical-diagnosis/getting-started.adoc
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -9,9 +9,6 @@ aliases: /medical-diagnosis/getting-started/
:_content-type: ASSEMBLY
include::modules/comm-attributes.adoc[]

//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images
[id="deploying-med-pattern"]
== Deploying the {med-pattern}

Expand Down Expand Up @@ -43,9 +40,6 @@ For information about creating the buckets on other cloud providers, see the fol
* link:https://docs.microsoft.com/en-us/azure/storage/common/storage-account-create?tabs=azure-portal[Azure Blob Storage]
* link:https://cloud.google.com/storage/docs/quickstart-console[GCP Cloud Storage]

//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images

[id="utilities"]
== Utilities
Expand Down Expand Up @@ -240,9 +234,6 @@ Before you run the `./pattern.msh make install` command, ensure that you have th

//image::/videos/predeploy.svg[link="/videos/predeploy.svg"]

//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images
[id="med-deploy-pattern_{context}"]
== Deploy

Expand Down Expand Up @@ -270,9 +261,6 @@ image::/videos/xray-deployment.svg[link="/videos/xray-deployment.svg"]
.. Check that the Operator is installed in the `openshift-operators` namespace and its status is `Succeeded`. Ensure that {ocp-data-short} is listed in the list of installed Operators.


//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images
[id="using-openshift-gitops-to-check-on-application-progress-getting-started"]
=== Using OpenShift GitOps to check on Application progress

Expand Down Expand Up @@ -316,23 +304,16 @@ Examine the `medical-diagnosis-hub` ArgoCD instance. You can track all the appli
. Check that all applications are synchronized. There are thirteen different ArgoCD `applications` that are deployed as part of this pattern.


//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images
[id="viewing-the-grafana-based-dashboard-getting-started"]
=== Viewing the Grafana based dashboard

. Accept the SSL certificates on the browser for the dashboard. In the {ocp} web console, go to the Routes for project `openshift-storage``. Click the URL for the `s3-rgw`.
+
image::medical-edge/storage-route.png[link="/images/medical-edge/storage-route.png"]
image::/images/medical-edge/storage-route.png[link="/images/medical-edge/storage-route.png"]
+
Ensure that you see some XML and not the access denied error message.
+
image::medical-edge/storage-rgw-route.png[link="/images/medical-edge/storage-rgw-route.png"]

. While still looking at Routes, change the project to `xraylab-1`. Click the URL for the `image-server`. Ensure that you do not see an access denied error message. You must to see a `Hello World` message.
+
image::medical-edge/grafana-routes.png[link="/images/medical-edge/grafana-routes.png"]
image::/images/medical-edge/storage-rgw-route.png[link="/images/medical-edge/storage-rgw-route.png"]

. Turn on the image file flow. There are three ways to go about this.
+
Expand All @@ -345,27 +326,24 @@ $ oc scale deployment/image-generator --replicas=1 -n xraylab-1
+
Or you can go to the OpenShift UI and change the view from Administrator to Developer and select Topology. From there select the `xraylab-1` project.
+
image::medical-edge/dev-topology.png[link="/images/medical-edge/dev-topology.png"]
image::/images/medical-edge/dev-topology.png[link="/images/medical-edge/dev-topology.png"]
+
Right-click on the `image-generator` pod icon and select `Edit Pod count`.
+
image::medical-edge/dev-topology-menu.png[link="/images/medical-edge/dev-topology-menu.png"]
image::/images/medical-edge/dev-topology-menu.png[link="/images/medical-edge/dev-topology-menu.png"]
+
Up the pod count from `0` to `1` and save.
+
image::medical-edge/dev-topology-pod-count.png[link="/images/medical-edge/dev-topology-pod-count.png"]
image::/images/medical-edge/dev-topology-pod-count.png[link="/images/medical-edge/dev-topology-pod-count.png"]
+
Alternatively, you can have the same outcome on the Administrator console.
+
Go to the OpenShift UI under Workloads, select Deployments for Project `xraylab-1`.
Click `image-generator` and increase the pod count to 1.
+
image::medical-edge/start-image-flow.png[link="/images/medical-edge/start-image-flow.png"]
image::/images/medical-edge/start-image-flow.png[link="/images/medical-edge/start-image-flow.png"]


//Module to be included
//:_content-type: PROCEDURE
//:imagesdir: ../../../images
[id="making-some-changes-on-the-dashboard-getting-started"]
=== Making some changes on the dashboard

Expand Down