v0.1.0 - Initial working release
Highlights
Initial release of shiftml-workflows with a working CLI + library stack.
Added
shiftmlwf infoandshiftmlwf predict- Deterministic output schema (
SCHEMA_VERSION=1) - Stable row ordering:
(source_file, frame, atom_i) - Per-frame cache with chunked storage and per-writer index logs
- Atomic writes for
results.*andrun.json - Provenance (
run.json) with timings and runtime metadata - Tests + GitHub CI scaffold
- Example input/config plus Snakemake and AiiDA integration skeletons
Verified
- Unit tests passing (
12 passed, 1 skipped) - CLI smoke + prediction run successful
- Cache reuse confirmed (
cache_hits > 0on rerun)
Notes
- Missing cell/PBC in
.xyzis normalized to non-periodic zeros and recorded as warning/provenance. - Upstream ShiftML may emit metatomic/torch compatibility warnings depending on environment.