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@github-actions github-actions released this 16 Oct 17:42
· 65 commits to main since this release

New

  • filter-singletons to remove reads with singleton barcodes
  • filter-invalid to remove invalid barcodes
  • fastq file writing has been replaced with a fancy new internal cache object that can be configured with the hidden option --cache-size to help control gzip output speed
    • this also means no more writing uncompressed fastq and compressing after-- all fastq output is gzipped-on-write