BUG: add multishell and zSpace md5 test case files #341
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@Hui-Xie The one-time use script for chop.cpp needs to be removed. If you want to save the code for future reference, then move it to your OneNote notebook, but do not submit it to BRAINSTools.
| @@ -4,6 +4,11 @@ | |||
| set(DWITarDir ${TestData_DIR}/DWI_TestData_TARBALLS) | |||
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| #make sure: tarballs are stored in /scratch/hxie1/Projects/BrainsToolsBuild/ExternalData/TestData/DWI_TestData_TARBALLS/ | |||
| # 1 upload testcase file into BRAINSTools/Public/ in http://slicer.kitware.com; | |||
DWIConvert/TestSuite/CMakeLists.txt
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| @@ -44,8 +49,9 @@ ${DWITarDir}/SiemensTrioTim2.tar.gz | |||
| ${DWITarDir}/SiemensTrioTim3.tar.gz | |||
| ${DWITarDir}/SiemensTrioTimBigEndian1.tar.gz | |||
| ${DWITarDir}/SiemensVerio.tar.gz | |||
| ${DWITarDir}/DWIConvertMultiShellFSITestSmallSize.tar.gz | |||
DWIConvert/TestSuite/CMakeLists.txt
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| @@ -96,7 +102,7 @@ foreach(CLP DWICompare DWISimpleCompare) | |||
| endforeach() | |||
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| ## Tool for comparing if BVec and BVal files are the same. | |||
| add_executable(BFileCompareTool BFileCompareTool.cpp) | |||
| add_executable(BFileCompareTool BFileCompareTool.cpp chop.cpp) | |||
There was a problem hiding this comment.
chop.cpp should not be in this line.
DWIConvert/TestSuite/CMakeLists.txt
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| @@ -130,6 +136,10 @@ set(TstOutput ${CMAKE_CURRENT_BINARY_DIR}) | |||
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| set(DWIBASELINE_DIR ${TestData_DIR}/DWI_TestData_OUTPUTS) | |||
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| ## DUMMYPROG | |||
There was a problem hiding this comment.
This was a one time use script. It should not be compiled every night, or perhaps ever again.
If you wish to keep the code for historical purposes, it needs to be commented-out, or moved somewhere else.
This is probably not worth keeping around in it's current form. Copy and paste it into one of your OneNote notebooks and keep it out of BRAINSTools
DWIConvert/TestSuite/chop.cpp
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| @@ -0,0 +1,37 @@ | |||
| // | |||
There was a problem hiding this comment.
This file does not belong in BRAINSTools. It was a quick one-time use script.
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According to professor's suggestions, I deleted the one time script file. I did the Ctest again this morning. All 69 Ctest case passed which includes 2 new added test cases. Changes have been submitted into this pull request. Thanks. |
Hui-Xie
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Add MultiShell and zSpace's test files into Slicer.kitware.com, and modify corresponding ctest files.
Passed test like below:
putamen:$ ctest
Test project /scratch/hxie1/Projects/BrainsToolsBuild/DWIConvert
Start 1: Uncompress_DWIConvertGeSignaHdxBMatrixTest.tar.gz
1/69 Test #1: Uncompress_DWIConvertGeSignaHdxBMatrixTest.tar.gz .......... Passed 0.01 sec
Start 2: Uncompress_DWIConvertGeSignaHdxBigEndianTest.tar.gz
2/69 Test #2: Uncompress_DWIConvertGeSignaHdxBigEndianTest.tar.gz ........ Passed 0.01 sec
Start 3: Uncompress_DWIConvertGeSignaHdxFSLTest.tar.gz
3/69 Test #3: Uncompress_DWIConvertGeSignaHdxFSLTest.tar.gz .............. Passed 0.01 sec
Start 4: Uncompress_DWIConvertGeSignaHdxTest.tar.gz
4/69 Test #4: Uncompress_DWIConvertGeSignaHdxTest.tar.gz ................. Passed 0.01 sec
Start 5: Uncompress_DWIConvertGeSignaHdxtBMatrixTest.tar.gz
5/69 Test #5: Uncompress_DWIConvertGeSignaHdxtBMatrixTest.tar.gz ......... Passed 0.01 sec
Start 6: Uncompress_DWIConvertGeSignaHdxtTest.tar.gz
6/69 Test #6: Uncompress_DWIConvertGeSignaHdxtTest.tar.gz ................ Passed 0.01 sec
Start 7: Uncompress_DWIConvertPhilipsAchieva2BMatrixTest.tar.gz
7/69 Test #7: Uncompress_DWIConvertPhilipsAchieva2BMatrixTest.tar.gz ..... Passed 0.01 sec
Start 8: Uncompress_DWIConvertPhilipsAchieva2Test.tar.gz
8/69 Test #8: Uncompress_DWIConvertPhilipsAchieva2Test.tar.gz ............ Passed 0.01 sec
Start 9: Uncompress_DWIConvertPhilipsAchieva3Test.tar.gz
9/69 Test #9: Uncompress_DWIConvertPhilipsAchieva3Test.tar.gz ............ Passed 0.01 sec
Start 10: Uncompress_DWIConvertPhilipsAchieva4Test.tar.gz
10/69 Test #10: Uncompress_DWIConvertPhilipsAchieva4Test.tar.gz ............ Passed 0.01 sec
Start 11: Uncompress_DWIConvertPhilipsAchieva6Test.tar.gz
11/69 Test #11: Uncompress_DWIConvertPhilipsAchieva6Test.tar.gz ............ Passed 0.01 sec
Start 12: Uncompress_DWIConvertPhilipsAchieva7Test.tar.gz
12/69 Test #12: Uncompress_DWIConvertPhilipsAchieva7Test.tar.gz ............ Passed 0.01 sec
Start 13: Uncompress_DWIConvertPhilipsAchievaBMatrixTest.tar.gz
13/69 Test #13: Uncompress_DWIConvertPhilipsAchievaBMatrixTest.tar.gz ...... Passed 0.01 sec
Start 14: Uncompress_DWIConvertPhilipsAchievaBigEndianTest.tar.gz
14/69 Test #14: Uncompress_DWIConvertPhilipsAchievaBigEndianTest.tar.gz .... Passed 0.01 sec
Start 15: Uncompress_DWIConvertPhilipsAchievaTest.tar.gz
15/69 Test #15: Uncompress_DWIConvertPhilipsAchievaTest.tar.gz ............. Passed 0.01 sec
Start 16: Uncompress_DWIConvertSiemensTrioSyngo2004A1Test.tar.gz
16/69 Test #16: Uncompress_DWIConvertSiemensTrioSyngo2004A1Test.tar.gz ..... Passed 0.01 sec
Start 17: Uncompress_DWIConvertSiemensTrioSyngo2004A2Test.tar.gz
17/69 Test #17: Uncompress_DWIConvertSiemensTrioSyngo2004A2Test.tar.gz ..... Passed 0.01 sec
Start 18: Uncompress_DWIConvertSiemensTrioTim2Test.tar.gz
18/69 Test #18: Uncompress_DWIConvertSiemensTrioTim2Test.tar.gz ............ Passed 0.01 sec
Start 19: Uncompress_DWIConvertSiemensTrioTim3Test.tar.gz
19/69 Test #19: Uncompress_DWIConvertSiemensTrioTim3Test.tar.gz ............ Passed 0.01 sec
Start 20: Uncompress_DWIConvertSiemensTrioTimBigEndian1Test.tar.gz
20/69 Test #20: Uncompress_DWIConvertSiemensTrioTimBigEndian1Test.tar.gz ... Passed 0.01 sec
Start 21: Uncompress_DWIConvertSiemensTrioTimTest.tar.gz
21/69 Test #21: Uncompress_DWIConvertSiemensTrioTimTest.tar.gz ............. Passed 0.01 sec
Start 22: Uncompress_DWIConvertSiemensVerioTest.tar.gz
22/69 Test #22: Uncompress_DWIConvertSiemensVerioTest.tar.gz ............... Passed 0.01 sec
Start 23: Uncompress_GeSignaHDx.tar.gz
23/69 Test #23: Uncompress_GeSignaHDx.tar.gz ............................... Passed 1.48 sec
Start 24: Uncompress_GeSignaHDxBigEndian.tar.gz
24/69 Test #24: Uncompress_GeSignaHDxBigEndian.tar.gz ...................... Passed 1.31 sec
Start 25: Uncompress_GeSignaHDxt.tar.gz
25/69 Test #25: Uncompress_GeSignaHDxt.tar.gz .............................. Passed 1.93 sec
Start 26: Uncompress_PhilipsAchieva1.tar.gz
26/69 Test #26: Uncompress_PhilipsAchieva1.tar.gz .......................... Passed 0.80 sec
Start 27: Uncompress_PhilipsAchieva2.tar.gz
27/69 Test #27: Uncompress_PhilipsAchieva2.tar.gz .......................... Passed 0.81 sec
Start 28: Uncompress_PhilipsAchieva3.tar.gz
28/69 Test #28: Uncompress_PhilipsAchieva3.tar.gz .......................... Passed 0.80 sec
Start 29: Uncompress_PhilipsAchieva4.tar.gz
29/69 Test #29: Uncompress_PhilipsAchieva4.tar.gz .......................... Passed 0.80 sec
Start 30: Uncompress_PhilipsAchieva6.tar.gz
30/69 Test #30: Uncompress_PhilipsAchieva6.tar.gz .......................... Passed 0.96 sec
Start 31: Uncompress_PhilipsAchieva7.tar.gz
31/69 Test #31: Uncompress_PhilipsAchieva7.tar.gz .......................... Passed 0.83 sec
Start 32: Uncompress_PhilipsAchievaBigEndian1.tar.gz
32/69 Test #32: Uncompress_PhilipsAchievaBigEndian1.tar.gz ................. Passed 0.82 sec
Start 33: Uncompress_SiemensTrio-Syngo2004A-1.tar.gz
33/69 Test #33: Uncompress_SiemensTrio-Syngo2004A-1.tar.gz ................. Passed 0.91 sec
Start 34: Uncompress_SiemensTrio-Syngo2004A-2.tar.gz
34/69 Test #34: Uncompress_SiemensTrio-Syngo2004A-2.tar.gz ................. Passed 0.92 sec
Start 35: Uncompress_SiemensTrioTim1.tar.gz
35/69 Test #35: Uncompress_SiemensTrioTim1.tar.gz .......................... Passed 0.35 sec
Start 36: Uncompress_SiemensTrioTim2.tar.gz
36/69 Test #36: Uncompress_SiemensTrioTim2.tar.gz .......................... Passed 0.35 sec
Start 37: Uncompress_SiemensTrioTim3.tar.gz
37/69 Test #37: Uncompress_SiemensTrioTim3.tar.gz .......................... Passed 0.36 sec
Start 38: Uncompress_SiemensTrioTimBigEndian1.tar.gz
38/69 Test #38: Uncompress_SiemensTrioTimBigEndian1.tar.gz ................. Passed 0.35 sec
Start 39: Uncompress_SiemensVerio.tar.gz
39/69 Test #39: Uncompress_SiemensVerio.tar.gz ............................. Passed 0.34 sec
Start 40: Uncompress_DWIConvertMultiShellFSITestSmallSize.tar.gz
40/69 Test #40: Uncompress_DWIConvertMultiShellFSITestSmallSize.tar.gz ..... Passed 0.02 sec
Start 41: Uncompress_SpaceThicknessDiffDicom.tar.gz
41/69 Test #41: Uncompress_SpaceThicknessDiffDicom.tar.gz .................. Passed 0.02 sec
Start 42: DWIConvertDWICompareHelpTest
42/69 Test #42: DWIConvertDWICompareHelpTest ............................... Passed 0.15 sec
Start 43: DWIConvertGeSignaHdxTest
43/69 Test #43: DWIConvertGeSignaHdxTest ................................... Passed 58.45 sec
Start 44: DWIConvertGeSignaHdxFSLTest
44/69 Test #44: DWIConvertGeSignaHdxFSLTest ................................ Passed 30.23 sec
Start 45: FSLToNrrdTest
45/69 Test #45: FSLToNrrdTest .............................................. Passed 11.03 sec
Start 46: NrrdToFSLTest
46/69 Test #46: NrrdToFSLTest .............................................. Passed 39.44 sec
Start 47: NrrdToFSLTest2
47/69 Test #47: NrrdToFSLTest2 ............................................. Passed 39.23 sec
Start 48: DWIConvertGeSignaHdxBigEndianTest
48/69 Test #48: DWIConvertGeSignaHdxBigEndianTest .......................... Passed 58.50 sec
Start 49: DWIConvertGeSignaHdxBMatrixTest
49/69 Test #49: DWIConvertGeSignaHdxBMatrixTest ............................ Passed 58.57 sec
Start 50: DWIConvertGeSignaHdxtTest
50/69 Test #50: DWIConvertGeSignaHdxtTest .................................. Passed 91.71 sec
Start 51: DWIConvertGeSignaHdxtBMatrixTest
51/69 Test #51: DWIConvertGeSignaHdxtBMatrixTest ........................... Passed 92.33 sec
Start 52: DWIConvertPhilipsAchievaTest
52/69 Test #52: DWIConvertPhilipsAchievaTest ............................... Passed 41.50 sec
Start 53: DWIConvertPhilipsAchievaBigEndianTest
53/69 Test #53: DWIConvertPhilipsAchievaBigEndianTest ...................... Passed 41.04 sec
Start 54: DWIConvertPhilipsAchievaBMatrixTest
54/69 Test #54: DWIConvertPhilipsAchievaBMatrixTest ........................ Passed 41.15 sec
Start 55: DWIConvertPhilipsAchieva2Test
55/69 Test #55: DWIConvertPhilipsAchieva2Test .............................. Passed 40.17 sec
Start 56: DWIConvertPhilipsAchieva2BMatrixTest
56/69 Test #56: DWIConvertPhilipsAchieva2BMatrixTest ....................... Passed 40.17 sec
Start 57: DWIConvertPhilipsAchieva3Test
57/69 Test #57: DWIConvertPhilipsAchieva3Test .............................. Passed 38.21 sec
Start 58: DWIConvertPhilipsAchieva4Test
58/69 Test #58: DWIConvertPhilipsAchieva4Test .............................. Passed 41.36 sec
Start 59: DWIConvertPhilipsAchieva6Test
59/69 Test #59: DWIConvertPhilipsAchieva6Test .............................. Passed 45.02 sec
Start 60: DWIConvertPhilipsAchieva7Test
60/69 Test #60: DWIConvertPhilipsAchieva7Test .............................. Passed 45.39 sec
Start 61: DWIConvertSiemensTrioTimTest
61/69 Test #61: DWIConvertSiemensTrioTimTest ............................... Passed 22.83 sec
Start 62: DWIConvertSiemensTrioTimBigEndian1Test
62/69 Test #62: DWIConvertSiemensTrioTimBigEndian1Test ..................... Passed 22.94 sec
Start 63: DWIConvertSiemensTrioTim2Test
63/69 Test #63: DWIConvertSiemensTrioTim2Test .............................. Passed 23.03 sec
Start 64: DWIConvertSiemensTrioTim3Test
64/69 Test #64: DWIConvertSiemensTrioTim3Test .............................. Passed 22.70 sec
Start 65: DWIConvertSiemensVerioTest
65/69 Test #65: DWIConvertSiemensVerioTest ................................. Passed 22.99 sec
Start 66: DWIConvertSiemensTrio_Syngo2004A_1Test
66/69 Test #66: DWIConvertSiemensTrio_Syngo2004A_1Test ..................... Passed 15.52 sec
Start 67: DWIConvertSiemensTrio_Syngo2004A_2Test
67/69 Test #67: DWIConvertSiemensTrio_Syngo2004A_2Test ..................... Passed 15.59 sec
Start 68: SpaceThicknessDiffDicom
68/69 Test #68: SpaceThicknessDiffDicom .................................... Passed 0.23 sec
Start 69: DWIConvertMultiShellFSITestSmallSize
69/69 Test #69: DWIConvertMultiShellFSITestSmallSize ....................... Passed 3.70 sec
100% tests passed, 0 tests failed out of 69
Total Test time (real) = 1017.49 sec
putamen:$