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Releases: Bart-Steemans/bactoscoop

BactoScoop 0.1.2

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@Bart-Steemans Bart-Steemans released this 09 Oct 08:04

BactoScoop 0.1.2 fixes excessive memory use when rebuilding oversized daughter meshes.

  • Added max_daughter_cell_mesh_rows to the mesh pipeline (default 800; integer >= 4), with early rejection before reconstruction and final checks on both daughters.
  • Documented the parameter in the mesh guide and API reference.
  • Updated the shared README to install the latest stable PyPI release by default and updated the MIT license copyright to 2026.

All 81 tests and both supplied-mask walkthroughs passed before publication and after a fresh installation from PyPI.

Install in a Python 3.10 environment:

pip install bactoscoop

For an existing installation, use pip install --upgrade bactoscoop.

Documentation ? PyPI

BactoScoop 0.1.1

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@Bart-Steemans Bart-Steemans released this 08 Oct 09:33

BactoScoop 0.1.1 is available on PyPI.

  • Updated installation guidance and the shared GitHub/PyPI README.
  • Refreshed documentation with Govers Lab attribution.
  • Validated wheel and source distribution; all 75 tests and both supplied-mask walkthroughs passed after installation from PyPI.

Install with Python 3.10:

python -m pip install bactoscoop==0.1.1

Documentation ? PyPI