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pyBer 0.49

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@github-actions github-actions released this 07 Sep 16:42
· 32 commits to main since this release
v0.49
b756ff4

pyBer 0.49

This release refreshes the analysis workspace and corrects postprocessing and export inconsistencies.

Downloads

  • Windows GUI: download pyBer-windows.zip, extract the complete folder, then run pyBer/pyBer.exe. Keep the _internal folder beside the executable.
  • Windows CLI: download pyBer-cli-windows.exe. Check the version with --version.

Highlights

  • Clean, data-aware empty workspaces. Plots and their controls appear when data is available; clearing recordings removes old results.
  • Consistent white vector tool icons, understated panel headings without circular initial badges, and more reliable Windows taskbar branding at high display scaling.
  • Midnight, Paper, and Sand plot themes, resizable plot cards, focused layouts, and adjustable heatmap contrast.
  • Onset and offset exports have distinguishable names. Repeated export bundles preserve previous files, and individual exports use the selected recording.
  • More consistent HDF5/CSV export coverage, export manifests, and publication figures in PNG, PDF, and SVG.
  • Corrected missing-data handling, event grouping/filtering, uncertainty estimates, exact-window AUC, exclusion handling, and stale-result clearing.

Analysis compatibility

Numerical corrections can change results near missing samples and recording boundaries. Baseline z-scores reject flat or insufficient baselines. Mean and SEM use finite contributing rows; incomplete AUC windows remain unavailable.

Pre/post comparisons use an exact paired sign test. Trial-level inference within a recording remains exploratory; pooled trials across animals do not receive inferential p-values. Publication p-values are unadjusted across behaviors. See the user guide for assumptions and conventions.

The FLMM path still requires a working external R/fastFMM setup. These Windows packages do not bundle a complete R installation.

Full changes: v0.48...v0.49

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