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BioZig v0.2.0

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@Sulkysubject37 Sulkysubject37 released this 10 Aug 08:48

BioZig v0.2.0

Core Architecture Advancements

SRFScheduler Integration: Formally implemented the Structural Recomputation Framework, enforcing strict $\mathcal{O}(L)$ memory bounds.
Deterministic OOM Panics: Replaced OS-level Out-of-Memory crashes with deterministic `SRF Memory Budget Exceeded` panics, guaranteeing stable DAG task execution via lock-free atomic arenas.
Unified Build Matrix: Multi-language versioning synchronized (`0.2.0`) across Zig core,

New Analytical Domains

ATLAZ Engine: Deployed topological engine for $H_1$ persistent homology and non-Euclidean recombination detection (`biozig atlaz`).

TiMSA Engine: Implemented topology-inspired multiple sequence alignment. Features the C++ Network Fusion Kernel (TiMSA/fuse_network.cpp) to fuse structural rigidity with statistical epistasis (biozig timsa). *

Standalone Binaries

Attached below are zero-dependency, statically cross-compiled binaries. Each archive contains the master biozig CLI as well as standalone timsa and atlaz tools:
Linux: x86_64, aarch64 (ARM), and riscv64 (Musl-static)
macOS: x86_64 (Intel) and aarch64 (Apple Silicon)
Windows: x86_64 (Intel/AMD) and aarch64 (Snapdragon/ARM)