v2.0.0

New Features

• NodeSets object can be instantiated with three methods: from_file, from_string, from_dict
• Simulation inputs are now accessible with Simulation.inputs
• libsonata reader of synapse_replay files can now be accessed with simulation.inputs["<input_name>"].reader
  • only h5 format is supported

Improvements

• Node set resolution is done by libsonata
• Simulation node set extends Circuit node set
  • A warning is raised if any of the circuit's node sets is overwritten
• Added kwarg: raise_missing_property to NodePopulation.get
• Undeprecated calling Edges.get and EdgePopulation.get with properties=None

Bug Fixes

• Fixed the Same property with different dtype issue with nodes.get, edges.get

Breaking Changes

• nodes.get and edges.get (and network.get) no longer return a dataframe
  • returns a generator yielding tuples of (<population_name>, <dataframe>) instead
  • to get the previous behavior (all in one dataframe): pd.concat(df for _, df in circuit.nodes.get(*args, **kwargs))
• Removed Network.property_dtypes, CircuitIds.index_schema
• Circuit.node_sets, Simulation.node_sets returns NodeSets object initialized with empty dict when node sets file is not present
• NodeSet.resolved is no longer available
• FrameReport.node_set returns node_set name instead of resolved node set query
• Removed Edges.properties, EdgePopulation.properties that were already supposed to be removed in v1.0.0