BIGr 0.7.2
- Fixed manual text errors
BIGr 0.7.1
- Updated
check_ped()to return corrected pedigree data in the result list instead of assigning objects to the global environment - Skipped long remote
madc2vcf_allintegration tests on CRAN while keeping them enabled in GitHub Actions
BIGr 0.7.0
Updates on dosage2vcf
- Added support for DArT SNP/INDEL 1-row and 2-row report formats
dosage2vcfnow validates marker and sample sets between report and counts files, then aligns counts to the report order before writing VCF genotypes- VCF
CHROMandPOSare derived fromChrom/ChromPoswhen present, otherwise fromMarkerName;MarkerNameis retained in the VCFIDfield - Missing SNP/INDEL genotype calls (
-/NA) are written as diploid missing genotypes (./.)
What's Changed
- Madc2vcf updates by @Cristianetaniguti in #53
- Madc2vcf and Pedigree functions updates by @Cristianetaniguti in #54
- Dosage2vcf update by @alex-sandercock in #60
- CRAN 7.2 submission by @alex-sandercock in #61
Full Changelog: v0.6.2...v0.7.2