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Give a more informative error messages when containers crash #283

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Merged
bethac07 merged 1 commit into from
Aug 7, 2025
Merged

Give a more informative error messages when containers crash #283

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2 changes: 2 additions & 0 deletions active_plugins/runcellpose.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1000,6 +1000,8 @@ def run(self, workspace):
cellpose_output = numpy.load(os.path.join(temp_img_dir, unique_name + "_seg.npy"), allow_pickle=True).item()
y_data = cellpose_output["masks"]
flows = cellpose_output["flows"]
except FileNotFoundError:
raise(FileNotFoundError("I'm sorry, Cellpose seems to have crashed and I'm not sure why, since it's in its own container."))
finally:
# Delete the temporary files
try:
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