This repository was archived by the owner on Feb 6, 2024. It is now read-only.
Beta version 1.6.beta
Pre-release
Pre-release
Notable new features:
- Polymorphism-aware models accounting for incomplete lineage sorting (code contributed by Dominik Schrempf).
- Lie Markov and non-reversible models (code contributed by Michael Woodhams).
- Heterotachy models accounting for rate variation across sites and lineages.
- Xeon Phi Knights Landing (AVX-512) support with 2X or more speedup.
- New option
-fastto match the speed of FastTree program while still obtaining better trees [Experimental].
New features:
-wqloption now prints quartet area and corner in.quartetlhfile (requested by Karen Meusemann).- Support GENE resampling (
-bspec GENE) and GENESITE resampling (-bspec GENESITE) for standard bootstrap with partition models. - Sequential and multicore versions are merged, thus
iqtree-ompexecutable becomesiqtree.
Bugfixes (inherited from 1.5.5-beta):
- Likelihood underflow for large multifurcating trees (e.g. consensus tree) (reported by Giap Nguyen).
- Crash with
-minsupnewoption (reported by Longzhi Tan). - Compilation with gcc under Mac (thanks @ilovezfs).
- Crash with -nni1 for partition model -spp (reported by Diep).