v0.2.0

0.2.0 — 2026-06-14

Project rename plus KEGG-reconstruction and CI improvements.

• Project renamed raven-python → raven-toolbox. The import package is now
  raven_toolbox (was raven_python) and the repository moved to
  SysBioChalmers/raven-toolbox. Update imports and any raven-python git/URL
  references accordingly. (#34)
• De-novo KEGG query uses hmmsearch instead of hmmscan.
  get_kegg_model_from_sequences now runs one hmmsearch over the concatenated KO
  library (-Z set to the profile count, so E-values and KO assignments are identical
  to the previous hmmscan path) — the faster, more parallel search direction.
  ensure_kegg_hmm_library no longer runs hmmpress (just gunzips); the published
  .hmm.gz artefact is unchanged. (#32)
• Domain-mode get_kegg_model_for_organism_from_artefacts auto-resolves the
  taxonomy artefact from the artefact directory, so "prokaryotes" /
  "eukaryotes" no longer require an explicit taxonomy= path. (#31)
• Test data no longer ships real KEGG records. The on-disk
  tests/data/kegg_dump is replaced by a session fixture that generates a fully
  fictional KEGG-format dump at runtime, so no KEGG-derived data is redistributed. (#33)
• Removed the visualization stub and the [visualization] extra — an
  unimplemented placeholder. (#30)
• CI on Node 24 — actions/checkout@v5, actions/setup-python@v6. (#35)