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@jsnagai jsnagai released this 22 Aug 16:23
· 159 commits to master since this release

New Features v1.4.0

  • Splitted generate_report function in two parts:
    • analise_LR() to only run the analysis without generating the CrossTalkeR report
    • make_report() to only generate a new CrossTalkeR report for existing CrossTalkeR results
  • Added node types to the network:
    • we now consider the annotation of a gene as ligand (L) or receptor (R) to consider the biological function
  • Less constrains on the cell cluster name annotation (only '$' must be avoided in the cluster naming)
  • Integration with liana-py for ligand-receptor interaction predictions