Dependencies

Dependencies

Core Dependencies

These are installed automatically with pip install upxo:

Package	Version	Purpose
numpy	>=2.2.6	Array operations
scipy	>=1.16.2	Scientific computing, interpolation
matplotlib	>=3.10.6	2D plotting
pandas	>=2.3.3	Data tables and property management
numba	>=0.62.1	JIT acceleration of MC algorithms
networkx	>=3.5	Grain network graph operations
pyvista[jupyter]	>=0.46.3	3D visualisation and mesh I/O
scikit-image	>=0.25.2	Image processing, connected components
scikit-learn	>=1.7.2	PCA, statistical learning
shapely	>=2.1.1	2D geometry operations
tqdm	>=4.67.1	Progress bars
seaborn	>=0.13.2	Statistical visualisation
colorama	>=0.4.6	Coloured terminal output
termcolor	>=2.4.0	Coloured terminal messages
connected-components-3d	>=3.26.1	Fast 3D connected component labelling
xlrd	>=2.0.1	Read .xls Excel dashboards
openpyxl	>=3.1.0	Read/write .xlsx Excel files
ipywidgets	>=8.0.0	Interactive Jupyter notebook widgets

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Optional Extras

Install only what you need:

Extra	Packages	Install command
[viz]	plotly>=5.0.0	pip install upxo[viz]
[mesh]	pyvoro>=1.3.2, tetgen>=0.8.2	pip install upxo[mesh]
[io]	rasterio>=1.4.3	pip install upxo[io]
[ebsd]	defdap==0.93.6	pip install upxo[ebsd]
[all]	All of the above	pip install upxo[all]

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Python Version

UPXO requires Python >= 3.13.