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This PR provides a solution for projects that may not have a previous job id associated with them (which was required in order to request further training). As an alternative, the values typically set in the initial superpixel generation step can be set in the
.histomicsui_config.yamlfile:radius: The size of superpixels generated (UI defaults to100)magnification: The magnification level at which to generate the superpixels (UI defaults to5)certainty: The metric used to determine the order that predictions are presented to the user (UI defaults toconfidence). Options areconfidence,margin,negative_entropy, orbatchbald.feature: The feature shape. Either superpixel image data (image) or foundation model vector (vector). The UI defaults toimage.If training is requested and there is no job id and the
radius,magnification,certainty, and/orfeaturekeys are not set in the config file, you will be notified of which are missing and have the option to open the config and set the missing values.NOTE: There is a bug around setting values in the config. Specifically, if a string value is set with single quotes (for example
feature: 'image') at the end of the file and there is a new line at the end (either added manually or automatically by using theFormatbutton) then the UI is not automatically notified of the change and will think that the value is still missing. This can be avoided by any of the following: