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ClusterCAD: a computational platform for type I modular polyketide synthase design

Copyright (c) 2022, The Regents of the University of California, through
Lawrence Berkeley National Laboratory (subject to receipt of any required
approvals from the U.S. Dept. of Energy).  All rights reserved.

Starting service (connect to HTTP at http://127.0.0.1:8000/):
docker compose up -d

Starting service with num_workers celery workers: 
docker compose up --scale celery=num_workers

Loading PKS data into database:
docker compose exec web /bin/bash -c 'cd pipeline && make clean && make all'

Shutting down (restart possible with up -d):
docker compose stop

Shut down and delete all containers:
docker compose down 

Building images:
docker compose build

Running commands inside running web container:
docker compose exec web /bin/bash

Creating a superuser for /admin:
docker compose exec web python3 manage.py createsuperuser

Obtaining a Django shell:
docker compose exec web python3 manage.py shell

Running jupyter notebook for development:
docker compose exec web jupyter notebook --no-browser --allow-root --ip 0.0.0.0 --port 8888

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A computational platform for type I modular PKS and NRPS design

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