v0.2.2

Change Log

0.2.2

Released on February 13, 2024.

Fixed

• Correct reference in README

Added

• New faster preprocessing method for GUI. Previosly resampling was done prior to cropping. Now first a large cropping is done, followed by resampling and finally a tighter crop is done. This drastically speed up pre- and post-processing, especially for larger volumetric images with small objects of interest.

v0.2.1

Change Log

0.2.1

Released on October 26, 2023.

Fixed

• Improve Docker image
• Fixed bug when no test segmentations were present in generating dataset json
• Fixed bug where self-trained model was loaded while using deployed model

Added

• Support for MONAI 1.2

v0.2.0

Change Log

0.2.0

Released on June 20, 2023.

Added

• Zenodo release
• Release on Pypi
• LICENSE added to all files
• Documentation for releases
• WORC models available on https://doi.org/10.5281/zenodo.8054038
• Models now downloadable and installable
• Added docker image for GUI (or atleast monailabel server for GUI)

Changed

• Personal author to group (BIGR)

v0.1.0

Change Log

0.1.0

Released on June 14, 2023.

Added

• First version of the Minimally Interactive Segmentation Method, containing:
  • InteractiveNet: a self-configuring workflow for finding the best configuration for preprocessing, training, postprocessing, ensembling based on dataset characteristics for interactive segmentation.
  • Generating synthetic interactions from ground truth segmentation, in order to pilot interactive segmentation.
  • A graphical user interface (GUI) in order to use InteractiveNet in 3D slicer or OHIF
  • Deployment of trained models
  • Licence, documentation and setup files.