BioSIFTR v1.2.0

The name of the pipeline has changed from Shallowmapping to BioSIFTR

• The optimisation of bwa-mem2 is dynamic #12
• The generation of DRAM visuals is optional #11
• A subworkfow was added to download the databases #8 and #9
• This version can be run with the following biomes available in MGnify Genomes catalogues:
  chicken-gut v1.0.1
  cow-rumen v1.0.1
  human-gut v2.0.2
  human-oral v1.0.1
  human-vaginal v1.0
  honeybee-gut v1.0.1
  marine v2.0
  mouse-gut v1.0
  non-model-fish-gut v2.0
  pig-gut v1.0
  sheep-rumen v1.0
  zebrafish-fecal v1.0