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Welcome to the Earlham Institute (EI) Genome Annotation Workshop 2026 wiki!

Test data download location:

Transcriptome assembly commands

Mikado commands

Annotation liftover commands

Reat transcriptome commands

Augustus commands

Helixer commands

GALBA commands

BRAKER3 commands

Minos commands

EVidenceModeler (EVM) commands

Annotation Web Apollo browser

Workshop data locations

Software tools used in the workshop

Guacamole tips

Troubleshooting