This repository was archived by the owner on May 20, 2026. It is now read-only.
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What's Changed
- Extract drug processing in Chembl data from db_chembl_data.php to db_chembl_drug.php allowing better separation of concerns
- Modify CONFIG_JOB to reflect the changes and possible data conflicts between the new db_chembl_drug.php
- Add missing PROCESS_CONTROL in db_insert_dom_sim, preventing the directory path to be updated.
- Add a RESTART capability to db_insert_dom_sim so that, in case of crash, avoids starting from the beginning, which would ultimately fails due to duplicated data.
- Avoid deleting the poestgresql files if the insertion fails to allow for debugging
- prd_dom_sim: Change the updateReleaseDate from 'SEQ_SIM' to 'DOM_SIM'
- db_dna.php: If the script has crashed, triggered a memory crash during subsequent run due to a continue statement that wasn't appropriate.
- Correct issue with rna_transcript table definition, where no primary key was defined
- GTEX: add the primary key to the export files.
- db_stat_gtex: correct job_name from db_gtex_stat to db_stat_gtex.
- db_stat_gtex: change file ranges
- process_gtex: avoid division by 0
- db_interpro: remove some addLog that greatly increases the logs for no good reasons
- db_insert_seq_sim: Add a process_control step to keep the working directory