What's Changed
- feat(suite): bismark whole-suite meta-crate — cargo install bismark installs all 12 tools (+ GA install docs) by @FelixKrueger in #1053
- ci: one-off workflow to publish the bismark meta-crate by @FelixKrueger in #1054
- feat(aligner): CBQ (.cbq) read input, un-parked on binseq 0.9.3 (#1025 Phase 3a) by @BenjaminDEMAILLE in #1052
- refactor(suite): fold the 14 Rust crates into one
bismarkcrate (Phase 2, incl. CBQ) by @FelixKrueger in #1057 - feat(suite): unified multicall CLI —
bismark <subcommand>+ classic-name aliases (Phase 3) by @FelixKrueger in #1058 - build(suite): package the single binary — symlinks + single-crate publish (Phase 4) by @FelixKrueger in #1059
- docs(suite): pivot to
bismark <subcommand>+ beta→GA reframe (Phase 5) by @FelixKrueger in #1060 - docs(site): fix stale pre-GA homepage (samtools, Perl framing, install, subcommands) by @FelixKrueger in #1062
- release(suite): prepare 3.0.0 GA — version bump + byte-identity gate + cleanup (Phase 6) by @FelixKrueger in #1063
Full Changelog: bismark-rust-v2.0.0...bismark-rust-v3.0.0