addGeneScoreMatrix does not work properly when subThreading is FALSE

[dagarfield]

Pretty simple bug:

addGeneScoreMatrix(projSpurp_doubletRemoved_filtered2, excludeChr = c("NC_001453.1"), force = TRUE, subThreading = FALSE )

Result:

Error in addGeneScoreMatrix(projSpurp_doubletRemoved_filtered2, excludeChr = c("NC_001453.1"), : object 'inputFiles' not found
Traceback:

1. addGeneScoreMatrix(projSpurp_doubletRemoved_filtered2, excludeChr = c("NC_001453.1"),
   . force = TRUE, subThreading = FALSE)

Likely cause (from the function):

if (subThreading) { h5disableFileLocking() } else { args$threads <- length(inputFiles) }

Presumably inputFiles should be ArrowFiles?
inputFiles is not an argument to addGeneScoreMatrix.

[rcorces]

Thanks for reporting this!

[dagarfield]

No problem! Nice to report something not related to my stupid non-model system genome for once.....

[jgranja24]

@dagarfield thanks for pointing this out this is updated in the newest release.