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Merged
merged 1 commit into from
Aug 20, 2025
Merged

Bump the python group across 1 directory with 4 updates #136

merged 1 commit into from
Aug 20, 2025

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@dependabot dependabot bot commented on behalf of github Aug 20, 2025

Bumps the python group with 4 updates in the / directory: dask, numpy, ome-zarr-models and scikit-image.

Updates dask from 2025.5.1 to 2025.7.0

Release notes

Sourced from dask's releases.

2025.7.0

Changes

See the Changelog for more information.

Commits

Updates numpy from 2.2.6 to 2.3.2

Release notes

Sourced from numpy's releases.

v2.3.2 (Jul 24, 2025)

NumPy 2.3.2 Release Notes

The NumPy 2.3.2 release is a patch release with a number of bug fixes and maintenance updates. The highlights are:

  • Wheels for Python 3.14.0rc1
  • PyPy updated to the latest stable release
  • OpenBLAS updated to 0.3.30

This release supports Python versions 3.11-3.14

Contributors

A total of 9 people contributed to this release. People with a "+" by their names contributed a patch for the first time.

  • !DWesl
  • Charles Harris
  • Joren Hammudoglu
  • Maanas Arora
  • Marco Edward Gorelli
  • Matti Picus
  • Nathan Goldbaum
  • Sebastian Berg
  • kostayScr +

Pull requests merged

A total of 16 pull requests were merged for this release.

  • #29256: MAINT: Prepare 2.3.x for further development
  • #29283: TYP: Work around a mypy issue with bool arrays (#29248)
  • #29284: BUG: fix fencepost error in StringDType internals
  • #29287: BUG: handle case in mapiter where descriptors might get replaced...
  • #29350: BUG: Fix shape error path in array-interface
  • #29412: BUG: Allow reading non-npy files in npz and add test
  • #29413: TST: Avoid uninitialized values in test (#29341)
  • #29414: BUG: Fix reference leakage for output arrays in reduction functions
  • #29415: BUG: fix casting issue in center, ljust, rjust, and zfill (#29369)
  • #29416: TYP: Fix overloads in np.char.array and np.char.asarray...
  • #29417: BUG: Any dtype should call square on arr \*\* 2 (#29392)
  • #29424: MAINT: use a stable pypy release in CI
  • #29425: MAINT: Support python 314rc1
  • #29429: MAINT: Update highway to match main.
  • #29430: BLD: use github to build macos-arm64 wheels with OpenBLAS and...
  • #29437: BUG: fix datetime/timedelta hash memory leak (#29411)

Checksums

... (truncated)

Commits
  • bc5e4f8 Merge pull request #29438 from charris/prepare-2.3.2
  • 4bc5960 REL: Prepare for the NumPy 2.3.2 release [wheel build]
  • 2679276 Merge pull request #29437 from charris/backport-29411
  • b0fa284 BUG: fix datetime/timedelta hash memory leak (#29411)
  • 6700579 Merge pull request #29425 from charris/support-python-314rc1
  • 40aa44d BUILD: Add Python 3.14 to wheel builds [wheel build]
  • 968fa73 Merge pull request #29430 from charris/backport-29069
  • 6ad9db9 Merge pull request #29429 from charris/update-highway
  • 3584ddd MAINT: Update highway to match main.
  • f78821f BLD: use github to build macos-arm64 wheels with OpenBLAS [wheel build]
  • Additional commits viewable in compare view

Updates ome-zarr-models from 0.1.7 to 0.1.10

Release notes

Sourced from ome-zarr-models's releases.

ome-zarr-models 0.1.10

What's Changed

Full Changelog: ome-zarr-models/ome-zarr-models-py@v0.1.9...v0.1.10

ome-zarr-models 0.1.9

What's Changed

Full Changelog: ome-zarr-models/ome-zarr-models-py@v0.1.8...v0.1.9

ome-zarr-models 0.1.8

What's Changed

New Contributors

Full Changelog: ome-zarr-models/ome-zarr-models-py@0.1.7...v0.1.8

Changelog

Sourced from ome-zarr-models's changelog.

## 0.1.10

Bug fixes

  • Creating a HCS group with well paths that do not point to existing well Zarr groups no longer errors.

Breaking changes

  • HCS.well_groups will now only return well groups that exist, instead of erroring out if a well group is defined in the HCS metadata but does not exist as a Zarr group.

0.1.9

Bug fixes

  • Add a maximum pydantic requirement of version 2.11.4. This fixes issues using several classes in ome-zarr-models. We hope to fix and remove this pydantic pin in a new release shortly.

0.1.8

Bug fixes

  • Fixed serialising models with model_dump(exclude_none=True). This (now fixed) bug was introduced in version 0.1.7.
Commits

Updates scikit-image from 0.25.1 to 0.25.2

Release notes

Sourced from scikit-image's releases.

v0.25.2

scikit-image 0.25.2

We're happy to announce the release of scikit-image 0.25.2!

Bug Fixes

  • Handle random degenerate case in skimage.graph.cut_normalized gracefully (#7675).
  • In skimage.feature.BRIEF, copy keypoints if necessary to preserve contiguity (#7692).
  • Revert a previous fix to skimage.segmentation.watershed that unintentionally changed the algorithm's behavior for markers placed at maxima in the image. We decided that the behavior originally reported as a bug (gh-6632), is not actually one (#7702).

Documentation

  • Improve docstring of skimage.restoration.rolling_ball (#7682).

Infrastructure

  • Only run the job if the PR got merged (vs merely closed) (#7679).
  • Fix typo in GH workflow (#7681).
  • Refactor GitHub's CI config and helper scripts (#7672).
  • Use pytest config in pyproject.toml in CI (#7555).
  • Lower CI build verbosity (#7688).
  • Port testing on Windows from Azure CI to GitHub's CI (#7687).
  • CI cleanup (#7693).
  • Simultaneously resolve all dependencies; add pip caching (#7690).
  • Reenable graph reproducibility test (#7694).
  • Give milestone labeler necessary permissions (#7695).
  • Milestone labeler permission not needed (#7696).
  • Fix 313t wheel build (#7699).

Maintenance

  • Include a missing image in meson.build so they are included in the wheel (#7660).
  • Add zizmor to pre-commit; address GH workflow issues raised (#7662).

Contributors

6 authors added to this release (alphabetically):

8 reviewers added to this release (alphabetically):

... (truncated)

Commits

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@dependabot
Bump the python group across 1 directory with 4 updates
9d45c49 
Bumps the python group with 4 updates in the / directory: [dask](https://github.com/dask/dask), [numpy](https://github.com/numpy/numpy), [ome-zarr-models](https://github.com/ome-zarr-models/ome-zarr-models-py) and [scikit-image](https://github.com/scikit-image/scikit-image).


Updates `dask` from 2025.5.1 to 2025.7.0
- [Release notes](https://github.com/dask/dask/releases)
- [Changelog](https://github.com/dask/dask/blob/main/docs/release-procedure.md)
- [Commits](dask/dask@2025.5.1...2025.7.0)

Updates `numpy` from 2.2.6 to 2.3.2
- [Release notes](https://github.com/numpy/numpy/releases)
- [Changelog](https://github.com/numpy/numpy/blob/main/doc/RELEASE_WALKTHROUGH.rst)
- [Commits](numpy/numpy@v2.2.6...v2.3.2)

Updates `ome-zarr-models` from 0.1.7 to 0.1.10
- [Release notes](https://github.com/ome-zarr-models/ome-zarr-models-py/releases)
- [Changelog](https://github.com/ome-zarr-models/ome-zarr-models-py/blob/main/docs/changelog.md)
- [Commits](ome-zarr-models/ome-zarr-models-py@0.1.7...v0.1.10)

Updates `scikit-image` from 0.25.1 to 0.25.2
- [Release notes](https://github.com/scikit-image/scikit-image/releases)
- [Changelog](https://github.com/scikit-image/scikit-image/blob/main/RELEASE.txt)
- [Commits](scikit-image/scikit-image@v0.25.1...v0.25.2)

---
updated-dependencies:
- dependency-name: dask
  dependency-version: 2025.7.0
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: numpy
  dependency-version: 2.3.2
  dependency-type: direct:production
  update-type: version-update:semver-minor
  dependency-group: python
- dependency-name: ome-zarr-models
  dependency-version: 0.1.10
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python
- dependency-name: scikit-image
  dependency-version: 0.25.2
  dependency-type: direct:production
  update-type: version-update:semver-patch
  dependency-group: python
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Aug 20, 2025
@dstansby dstansby merged commit 072c7bc into main Aug 20, 2025
3 checks passed
@dstansby dstansby deleted the dependabot/pip/python-b866dc6afd branch August 20, 2025 08:30
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